SCIENTIFIC RECORD

Publications

Explore Tribro-AI's comprehensive directory of 170 peer-reviewed articles, clinical trials, and technical frameworks at the intersection of AI and Biotechnology.

170
TOTAL ENTRIES SINCE 2008
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Senior AuthorJournal of Applied Genetics
2026

Transformative Applications and Innovations in Next-Generation Sequencing Data Analysis

Beura, Abhijit, Dakal, Tikam Chand, Rajguru, Mangesh Sudhakar, Manjunath, Gowrang K, Mahalingam, Shweta, Kumar, Abhishek

Journal of Applied Genetics VIEW open_in_new
Senior AuthorArchives of Medical Research
2026

Transcriptional and Pathway Level Heterogeneity in Luminal A Breast Cancer: A Framework for Precision Therapy

Manjunath, Gowrang Kasaba, Nashier, Disha, Kumar, Abhishek

Archives of Medical Research VIEW open_in_new
Collaborator3 Biotech
2026

Soil influences on rural versus urban human gut microbiota and implications on cardio-metabolic health: a comparative pilot study

Shukla, Avaneesh, Yadav, Meenu, Malik, Md Zubbair, Aditya, Abhishek Kumar, Kumar, Abhishek, Tandon, Ravi, Shalimar, Ray, Ashwini Kumar

3 Biotech VIEW open_in_new
Senior AuthorIntechOpen
2026

Ethics, Privacy and Biological Data: Challenges, Risks and Governance in the Era of Genomics and Personalized Medicine

Dakal, Tikam Chand, Beura, Abhijit, Kumar, Abhishek

IntechOpen VIEW open_in_new
Senior AuthorArchives of Medical Research
2026

Decoding the Mutational Hierarchy of Thyroid Cancer and Associated Signaling Pathways

Nashier, Disha, Manjunath, Gowrang Kasaba, Parveen, Alisha, Malik, Sumira, Mitra, Tamoghna, Goswami, Chandan, Neerathilingam, Muniasamy, Watts, Ankit, Kumar, Abhishek

Archives of Medical Research VIEW open_in_new
First Author3 Biotech
2026

Deciphering secondary metabolite potentials of halophilic marine-derived Aspergillus ruber

Kumar, Abhishek, Parveen, Alisha, Hansen, Frederik Teilfeldt, Sørensen, Jens Laurids, Bandapalli, Obul Reddy, Neerathilingam, Muniasamy, Prasad, Kumar Suranjit

3 Biotech VIEW open_in_new
Senior AuthorFunctional & Integrative Genomics
2026

An integrative mutational and network analysis of pancreatic cancer reveals key genes, and signalling pathways

Manjunath, Gowrang Kasaba, Kanchi, Lasya Priya, Dakal, Tikam Chand, Beura, Abhijit, Kumar, Abhishek

Functional & Integrative Genomics VIEW open_in_new
Senior AuthorElsevier
2025

Structural prediction of potent non-coding RNAs

Beura, Abhijit, Manjunath, Gowrang Kasaba, Dakal, Tikam Chand, Kumar, Abhishek

Elsevier VIEW open_in_new
Senior AuthorIntegrative Biology
2025

Role of RGD-binding Integrins in ovarian cancer progression, metastasis and response to therapy

Ranga, Vipin, Dakal, Tikam Chand, Maurya, Pawan Kumar, Johnson, Mark S, Sharma, Narendra Kumar, Kumar, Abhishek

Integrative Biology VIEW open_in_new
CollaboratorEuropean journal of endocrinology
2025

Prioritization of predisposition genes for familial non-medullary thyroid cancer by whole-genome sequencing

Srivastava, Aayushi, Skopelitou, Diamanto, Miao, Beiping, Giagiobbe, Sara, Paramasivam, Nagarajan, Kumar, Abhishek, Diquigiovanni, Chiara, Bonora, Elena, Bandapalli, Obul Reddy, Försti, Asta

European journal of endocrinology VIEW open_in_new
Senior AuthorPathology-Research and Practice
2025

Next generation DNA Sequencing data analysis and its application in clinical genomics

Beura, Abhijit, Manjunath, Gowrang K, Mahalingam, Shweta, Rajguru, Mangesh Sudhakar, Dakal, Tikam Chand, Kumar, Abhishek

Pathology-Research and Practice VIEW open_in_new
First AuthorMicrobiological Research
2025

Microbiome Based Precision Medicine through Integrated Multiomics and Machine Learning

Kumar, Abhishek, Xu, Caiming, Dakal, Tikam Chand

Microbiological Research VIEW open_in_new
CollaboratormedRxiv
2025

Genomic insights into extrapulmonary tuberculosis reveal enrichment of lineage 2 with high drug resistance in specific clinical phenotypes

Sharma, Kusum, Bhandari, Aravind, Manjunath, Gowrang Kasaba, Rastogi, Mona, Babu, Aishwarya S, Ponnusamy, Parthasarathy, Vasanthaiah, Shruthi, Vasudevan, Karthick, Yadav, Priyanka, George, John

Senior AuthorPathology-Research and Practice
2025

Genetic and Epigenetic Regulation of Non-coding RNAs: Implications in Cancer Metastasis, Stemness and Drug Resistance

Dakal, Tikam Chand, Philip, Reya Rene, Bhushan, Ravi, Sonar, Priyanka Vijay, Rajagopal, Senthilkumar, Kumar, Abhishek

Pathology-Research and Practice VIEW open_in_new
Senior AuthorIntegrative Biology
2025

GTF2I acts as a novel tumor suppressor transcription factor and shows Favorable prognosis in renal cancer

Dakal, Tikam Chand, Thakur, Mony, George, Nancy, Singh, Tiratha Raj, Yadav, Vinod, Kumar, Abhishek

Integrative Biology VIEW open_in_new
Senior AuthorMethods
2025

From sample to clinical insight: a review of exome sequencing in disease diagnostics

Manjunath, Gowrang Kasaba, Verma, Rohit Kumar, Berua, Abhijit, Mahalingam, Shweta, Dakal, Tikam Chand, Kumar, Abhishek

Senior AuthorBio‐Nanomaterials in Environmental Remediation: Industrial Applications
2025

Classification and Applications of Bio‐nanomaterials

Dakal, Tikam Chand, Bhushan, Ravi, Dhakar, Ramgopal, Kumar, Abhishek

Bio‐Nanomaterials in Environmental Remediation: Industrial Applications VIEW open_in_new
Senior AuthorBio‐Nanomaterials in Environmental Remediation: Industrial Applications
2025

Applications of Nanotechnology and Nanomaterials in Gas Industry

Dakal, Tikam Chand, Dhakar, Ramgopal, Bhushan, Ravi, Kumar, Abhishek

Bio‐Nanomaterials in Environmental Remediation: Industrial Applications VIEW open_in_new
Senior AuthorFrontiers in Medical Technology
2025

Advanced Computational Tools, Artificial Intelligence and Machine-learning Approaches in Gut Microbiota and Biomarker Identification

Dakal, Tikam C, Xu, Caiming, Kumar, Abhishek

Frontiers in Medical Technology VIEW open_in_new
Senior AuthorPathology-Research and Practice
2024

Unraveling the Genetic and Singaling Landscapes of Pediatric Cancer

Manjunath, Gowrang Kasaba, Ankam, Krishna Veni, Dakal, Tikam Chand, Sharma, MV Srihari, Nashier, Disha, Mitra, Tamoghna, Kumar, Abhishek

Pathology-Research and Practice VIEW open_in_new
Senior AuthorBiochemistry and Biophysics Reports
2024

Unconventional localization of PAI-1 in PML bodies: A possible link with cellular growth of endothelial cells

Gehlot, Pragya, Brünnert, Daniela, Kaushik, Vibha, Yadav, Arpana, Bage, Saloni, Gaur, Kritika, Saini, Mahesh, Ehrhardt, Jens, Manjunath, Gowrang Kasaba, Kumar, Abhishek

Biochemistry and Biophysics Reports VIEW open_in_new
Senior AuthorMolecular Biology Reports
2024

Transcriptomic study reveals alteration in the expression of long non-coding RNAs (lncRNAs) during reversal of HIV-1 latency in monocytic cell line

Rai, Ankita, Singh, Aradhana, Gaur, Ritu, Bhagchandani, Tannu, Verma, Anjali, Nikita, Kushwaha, Hemant Ritturaj, Malik, Rupali, Dandu, Himanshu, Kumar, Abhishek

Molecular Biology Reports VIEW open_in_new
CollaboratorScientific Data
2024

The chromosome level genome assembly of the Asian green mussel, Perna viridis

Sukumaran, Sandhya, Vysakh, VG, Sebastian, Wilson, Gopalakrishnan, A, Dharani, Lalitha Hari, Pandey, Akhilesh, Kumar, Abhishek, Jena, JK

Scientific Data VIEW open_in_new
CollaboratorReference Module in Life Sciences
2024

Systems Biology Resources

Presannan, Anandhu, Manoj, Gautham, Nair, Pramod P., Chavali, Laxmi, Melethadathil, Nidheesh, Zawar, Akshaykumar, Vijayan, Asha, Dakal, Tikam Chand, Kumar, Abhishek, Suravajhala, Prashanth

Reference Module in Life Sciences VIEW open_in_new
Senior AuthorReference Module in Life Sciences
2024

Semi-Supervised Learning in Bioinformatics

Parveen, Alisha, Dakal, Tikam Chand, Yadav, Pankaj, Kumar, Abhishek

Reference Module in Life Sciences VIEW open_in_new
Senior Authorhttps://link.springer.com/book/9781071641514
2024

Proteogenomics: Methods and Protocols

Allmer, Jens, Kumar, Abhishek

https://link.springer.com/book/9781071641514 VIEW open_in_new
First AuthorProteogenomics: Methods and Protocols
2024

Proteogenomics for Non-model Ocean-Derived Fungi

Kumar, Abhishek

Proteogenomics: Methods and Protocols VIEW open_in_new
Senior Author
2024

Proteogenomics

Allmer, Jens, Kumar, Abhishek

Tribro Research Group VIEW open_in_new
Senior AuthorCancers
2024

Predictive and Prognostic Relevance of Tumor-Infiltrating Immune Cells: Tailoring Personalized Treatments against Different Cancer Types

Dakal, Tikam Chand, George, Nancy, Xu, Caiming, Suravajhala, Prashanth, Kumar, Abhishek

CollaboratorCURRENT GENOMICS
2024

Plasma Virome of HIV-infected Subjects on Suppressive Antiretroviral Therapy Reveals Association of Differentially Abundant Viruses with Distinct T-cell Phenotypes and Inflammation

Bhagchandani, Tannu, Haque, Mohd Maksuf Ul, Sharma, Shilpa, Malik, Md Zubbair, Ray, Ashwini Kumar, Kaur, Urvinder S, Rai, Ankita, Verma, Anjali, Sawlani, Kamal Kumar, Chaturvedi, Rupesh

CURRENT GENOMICS VIEW open_in_new
CollaboratorMedComm
2024

Oncogenes and tumor suppressor genes: functions and roles in cancers

Dakal, Tikam Chand, Dhabhai, Bhanupriya, Pant, Anuja, Moar, Kareena, Chaudhary, Kanika, Yadav, Vikas, Ranga, Vipin, Sharma, Narendra Kumar, Kumar, Abhishek, Maurya, Pawan Kumar

CollaboratorGene
2024

MALAT1 is important for facilitating HIV-1 latency reversal in latently infected monocytes

Rai, Ankita, Singh, Aradhana, Gaur, Ritu, Verma, Anjali, Gulati, Sameer, Malik, Rupali, Dandu, Himanshu, Kumar, Abhishek, Tandon, Ravi

Senior AuthorProteogenomics: Methods and Protocols
2024

Introduction to Integrated Proteogenomic Pipeline for Dealing with Pathogenic Missense SNPs

Parveen, Alisha, Kumar, Abhishek

Proteogenomics: Methods and Protocols VIEW open_in_new
CollaboratorMedComm
2024

Intricate relationship between cancer stemness, metastasis, and drug resistance

Dakal, Tikam Chand, Bhushan, Ravi, Xu, Caiming, Gadi, Bhana Ram, Cameotra, Swaranjit Singh, Yadav, Vikas, Maciaczyk, Jarek, Schmidt‐Wolf, Ingo GH, Kumar, Abhishek, Sharma, Amit

Senior AuthorEncyclopedia of Bioinformatics and Computational Biology
2024

Identification of diagnostic biomarkers and pathways

Gowrang, KM, Dakal, Tikam Chand, Kumar, Abhishek

Encyclopedia of Bioinformatics and Computational Biology VIEW open_in_new
Senior AuthorReference Module in Life Sciences
2024

Identification of Diagnostic Biomarkers and Pathways

Manjunath, Gowrang Kasaba, Dakal, Tikam Chand, Kumar, Abhishek

Reference Module in Life Sciences VIEW open_in_new
Senior AuthorEncyclopedia of Bioinformatics and Computational Biology
2024

Identification and Extraction of Biomarker Information

Amala, K, Dakal, Tikam Chand, Beura, Abhijeet, Kumar, Abhishek

Encyclopedia of Bioinformatics and Computational Biology VIEW open_in_new
First AuthorProteogenomics: Methods and Protocols
2024

Genome Annotation

Kumar, Abhishek

Proteogenomics: Methods and Protocols VIEW open_in_new
CollaboratorFunctional & Integrative Genomics
2024

Engineering circular RNA for molecular and metabolic reprogramming

Sharma, Narendra Kumar, Dwivedi, Pragya, Bhushan, Ravi, Maurya, Pawan Kumar, Kumar, Abhishek, Dakal, Tikam Chand

Functional & Integrative Genomics VIEW open_in_new
Senior AuthorPathology-Research and Practice
2024

Emerging Methods and Techniques for Cancer Biomarker Discovery

Dakal, Tikam Chand, Dhakar, Ramgopal, Beura, Abhijit, Moar, Kareena, Maurya, Pawan Kumar, Sharma, Narendra Kumar, Ranga, Vipin, Kumar, Abhishek

Pathology-Research and Practice VIEW open_in_new
Senior AuthorEncyclopedia of Bioinformatics and Computational Biology
2024

Disease Biomarker Discovery

Dakal, Tikam Chand, Parveen, Alisha, Kumar, Abhishek

Encyclopedia of Bioinformatics and Computational Biology VIEW open_in_new
Senior AuthorReference Module in Life Sciences
2024

Disease Biomarker Discovery

Dakal, Tikam Chand, Parveen, Alisha, Kumar, Abhishek

Reference Module in Life Sciences VIEW open_in_new
CollaboratorTRP Channels as Therapeutic Targets
2024

Current understanding of TRP channels and their genomics: Implications in health research

Dubey, Nishant Kumar, Das, Nilesh Kumar, Mahapatra, Parnasree, Mohanta, Sushama, Shikha, Deep, Banerjee, Anushka, Sahu, Ram Prasad, Acharya, Tusar Kanta, Mishra, Subham, Kumar, Shamit

TRP Channels as Therapeutic Targets VIEW open_in_new
CollaboratormedRxiv
2024

Culture Free Whole Genome Sequencing of Mycobacterium tuberculosis using ligand-mediated bead enrichment method

Vasanthaiah, Shruthi, Verma, Renu, Kumar, Ajay, Bandari, Aravind, George, John, Rastogi, Mona, Kasaba Manjunath, Gowrang, Sharma, Jyoti, Kumar, Abhishek, Subramani, Janavi

CollaboratorEncyclopedia of Bioinformatics and Computational Biology
2024

Cancer Epigenetics and Bioinformatics

Dakal, Tikam Chand, Beura, Abhijit, Kaur, Amandeep, Gogoi, Bhaskar, Sengupta, Abhishek, Suravajhala, Prashanth, Abhishek, Kumar

Encyclopedia of Bioinformatics and Computational Biology VIEW open_in_new
Senior AuthorReference Module in Life Sciences
2024

Cancer Epigenetics and Bioinformatics

Dakal, Tikam Chand, Beura, Abhijit, Kaur, Amandeep, Gogoi, Bhaskar, Sengupta, Abhishek, Suravajhala, Prashanth, Kumar, Abhishek

Reference Module in Life Sciences VIEW open_in_new
Senior AuthorFunctional & Integrative Genomics
2024

Breast Cancer Genomic Analyses Reveal Genes, Mutations, and Signaling Networks

Manjunath, Gowrang, Sharma, Srishar, Nashier, Disha, Vasanthaiah, Shruthi, Jha, Spriha: Bage, Saloni, Mitra, Tamoghna, Goyal, Pankaj, Neerathilingam, Muniaswamy, Kumar, Abhishek

Functional & Integrative Genomics VIEW open_in_new
Senior AuthorProteogenomics: Methods and Protocols
2024

Biomarker Discovery via N-Glycoproteomics

Kumar, Rajesh, Kumar, Abhishek

Proteogenomics: Methods and Protocols VIEW open_in_new
CollaboratorEncyclopedia of Bioinformatics and Computational Biology
2024

Bioinformatics for Multi-omics Data Integration

Shekhawat, Rajveer Singh, Kashyap, Pragya, Swain, Asish Kumar, Dhiman, Vedikaa, Sharma, Jyoti, Kumar, Abhishek, Yadav, Pankaj

Encyclopedia of Bioinformatics and Computational Biology VIEW open_in_new
CollaboratorReference Module in Life Sciences
2024

Bioinformatics for Multi-Omics Data Integration

Singh, Rajveer, Shekhawat, Pragya, Kashyap, Asish Kumar, Vedikaa, Swain, Dhiman, Jyoti, Sharma, Abhishek, Kumar, Pankaj, Yadav

Reference Module in Life Sciences VIEW open_in_new
CollaboratorBiochemical Genetics
2024

A Comprehensive Pilot Study to Elucidate the Distinct Gut Microbial Composition and Its Functional Significance in Cardio-Metabolic Disease

Ray, Ashwini Kumar, Shukla, Avaneesh, Yadav, Alka, Kaur, Urvinder, Singh, Alok Kumar, Mago, Payal, Bhavesh, Neel Sarovar, Chaturvedi, Rupesh, Tandon, Ravi, Shalimar

Biochemical Genetics VIEW open_in_new
CollaboratorInternational Journal of Molecular Sciences
2023

Polymorphisms within Autophagy-Related Genes as Susceptibility Biomarkers for Multiple Myeloma: A Meta-Analysis of Three Large Cohorts and Functional Characterization

Clavero, Esther, Sanchez-Maldonado, José Manuel, Macauda, Angelica, Ter Horst, Rob, Sampaio-Marques, Belém, Jurczyszyn, Artur, Clay-Gilmour, Alyssa, Stein, Angelika, Hildebrandt, Michelle AT, Weinhold, Niels

International Journal of Molecular Sciences VIEW open_in_new
CollaboratorCells
2023

Investigation of Rare Non-Coding Variants in Familial Multiple Myeloma

Niazi, Yasmeen, Paramasivam, Nagarajan, Blocka, Joanna, Kumar, Abhishek, Huhn, Stefanie, Schlesner, Matthias, Weinhold, Niels, Sijmons, Rolf, De Jong, Mirjam, Durie, Brian

CollaboratorJournal of Biomolecular Structure and Dynamics
2023

CircRNA-miRNA-mRNA interactome analysis in endometrial cancer

Dakal, Tikam Chand, Kumar, Abhishek, Maurya, Pawan Kumar

Journal of Biomolecular Structure and Dynamics VIEW open_in_new
CollaboratorInternational Journal of Molecular Sciences
2022

Whole-Exome Sequencing Identifies a Novel Germline Variant in PTK7 Gene in Familial Colorectal Cancer

Miao, Beiping, Skopelitou, Diamanto, Srivastava, Aayushi, Giangiobbe, Sara, Dymerska, Dagmara, Paramasivam, Nagarajan, Kumar, Abhishek, Kuświk, Magdalena, Kluźniak, Wojciech, Paszkowska-Szczur, Katarzyna

International Journal of Molecular Sciences VIEW open_in_new
CollaboratorMolecular Genetics and Genomics
2022

Whole exome sequencing identifies novel germline variants of SLC15A4 gene as potentially cancer predisposing in familial colorectal cancer

Skopelitou, Diamanto, Srivastava, Aayushi, Miao, Beiping, Kumar, Abhishek, Dymerska, Dagmara, Paramasivam, Nagarajan, Schlesner, Matthias, Lubinski, Jan, Hemminki, Kari, Försti, Asta

Molecular Genetics and Genomics VIEW open_in_new
CollaboratorThe Journal of Membrane Biology
2022

Ratio of Hydrophobic–Hydrophilic and Positive–Negative Residues at Lipid–Water-Interface Influences Surface Expression and Channel Gating of TRPV1

Saha, Somdatta, Mohanta, Sushama, Das, Rashmita, Dalai, Ritesh, Tiwari, Nikhil, Tiwari, Ankit, Kumar, Abhishek, Goswami, Chandan

The Journal of Membrane Biology VIEW open_in_new
CollaboratorThe Marine Microbiome
2022

Marine Fungi

Burgaud, Gaëtan, Edgcomb, Virginia, Hassett, Brandon T, Kumar, Abhishek, Li, Wei, Mara, Paraskevi, Peng, Xuefeng, Philippe, Aurélie, Phule, Pradeep, Prado, Soizic

The Marine Microbiome VIEW open_in_new
Senior AuthorCancers
2022

Germline variants of CYBA and TRPM4 predispose to familial colorectal cancer

Zhu, Lizhen, Miao, Beiping, Dymerska, Dagmara, Kuswik, Magdalena, Bueno-Martínez, Elena, Sanoguera-Miralles, Lara, Velasco, Eladio A, Paramasivam, Nagarajan, Schlesner, Matthias, Kumar, Abhishek

Senior AuthormiRNomics
2022

Computational methods for predicting mature microRNAs

Yousef, Malik, Parveen, Alisha, Kumar, Abhishek

miRNomics VIEW open_in_new
CollaboratorCurrent Genomics
2022

Advancement in Deep Learning Methods for Diagnosis and Prognosis of Cervical Cancer

Gupta, Akshat, Parveen, Alisha, Kumar, Abhishek, Yadav, Pankaj

Current Genomics VIEW open_in_new
CollaboratorInternational Journal of Molecular Sciences
2021

Whole Exome Sequencing Identifies APCDD1 and HDAC5 Genes as Potentially Cancer Predisposing in Familial Colorectal Cancer

Skopelitou, Diamanto, Miao, Beiping, Srivastava, Aayushi, Kumar, Abhishek, Kuświk, Magdalena, Dymerska, Dagmara, Paramasivam, Nagarajan, Schlesner, Matthias, Lubiński, Jan, Hemminki, Kari

International Journal of Molecular Sciences VIEW open_in_new
CollaboratorInternational Journal for Computational Biology (IJCB)
2021

Treatment Strategies for COVID 19: New Insights from Comparative Genome Analysis, Pathophysiology, Host-Virus Interaction and Immune Response

Menon, Athira M, Ivanti, Tushar, Sharma, Ankita, Purohit, Sunil Dutta, Saklani, Joginder Singh, Kumar, Abhishek, Sharma, Narendra Kumar, Sharma, Amit, Dakal, Tikam Chand

International Journal for Computational Biology (IJCB) VIEW open_in_new
CollaboratorJournal of Integrative Bioinformatics
2021

Super-rapid race for saving lives by developing COVID-19 vaccines

Uttarilli, Anusha, Amalakanti, Sridhar, Kommoju, Phaneeswara-Rao, Sharma, Srihari, Goyal, Pankaj, Manjunath, Gowrang Kasaba, Upadhayay, Vineet, Parveen, Alisha, Tandon, Ravi, Prasad, Kumar Suranjit

Journal of Integrative Bioinformatics VIEW open_in_new
CollaboratorCancers
2021

Polymorphisms within Autophagy-Related Genes Influence the Risk of Developing Colorectal Cancer: A Meta-Analysis of Four Large Cohorts

Sainz, Juan, García-Verdejo, Francisco José, Martínez-Bueno, Manuel, Kumar, Abhishek, Sánchez-Maldonado, José Manuel, Díez-Villanueva, Anna, Vodičková, Ludmila, Vymetálková, Veronika, Martin Sánchez, Vicente, Da Silva Filho, Miguel Inacio

CollaboratorMar. Drugs
2021

Genomics- and Metabolomics-Based Investigation of the Deep-Sea Sediment-Derived Yeast, Rhodotorula mucilaginosa 50-3-19/20B

Buedenbender, Larissa, Kumar, Abhishek, Blümel, Martina, Kempken, Frank, Tasdemir, Deniz

Mar. Drugs VIEW open_in_new
CollaboratorInternational Journal of Phytocosmetics and Natural Ingredients
2021

Evaluation of some plant-derived natural ingredients against SARS-CoV-2: An in-silico approach

Menon, Athira M, Kumari, Priyanka, Nagoda, Chetna, Tekriwal, Shalini, Kumar, Abhishek, Purohit, Sunil Dutta, Dakal, Tikam Chand

International Journal of Phytocosmetics and Natural Ingredients VIEW open_in_new
CollaboratorEntropy 2021
2021

Application of Biological Domain Knowledge Based Feature Selection on Gene Expression Data

Yousef, Malik, Kumar, Abhishek, Bakir-Gungor, Burcu

Entropy 2021 VIEW open_in_new
CollaboratorGene Reports
2021

Antibiotic-resistant bacteria in municipal sewage water joining river ganga, at Prayagraj (India)

Kumar, Awanish, Kumar, Abhishek, Prasad, Kumar Suranjit

Gene Reports VIEW open_in_new
First AuthorHereditary Cancer in Clinical Practice
2021

A rare large duplication of MLH1 identified in Lynch syndrome

Kumar, Abhishek, Paramasivam, Nagarajan, Bandapalli, Obul Reddy, Schlesner, Matthias, Chen, Tianhui, Sijmons, Rolf, Dymerska, Dagmara, Golebiewska, Katarzyna, Kuswik, Magdalena, Lubinski, Jan

Hereditary Cancer in Clinical Practice VIEW open_in_new
CollaboratorBiotechnology and Genetic Engineering Reviews
2021

A perspective review on impact and molecular mechanism of environmental carcinogens on human health

Malik, Sumira, Prasad, Shilpa, Kishore, Shristi, Kumar, Abhishek, Upadhyay, Vineet

Biotechnology and Genetic Engineering Reviews VIEW open_in_new
CollaboratorJournal of cell communication and signaling
2021

A pathway map of signaling events triggered upon SARS-CoV infection

Parthasarathi, KT, Munjal, Nupur S, Dey, Gourav, Kumar, Abhishek, Pandey, Akhilesh, Balakrishnan, Lavanya, Sharma, Jyoti

Journal of cell communication and signaling VIEW open_in_new
CollaboratorPreprints
2021

A Novel Low-Risk Germline Variant in the SH2 Domain of the SRC Gene Affects Multiple Pathways in Familial Colorectal Cancer

Skopelitou, Diamanto, Miao, Beiping, Srivastava, Aayushi, Kumar, Abhishek, Kuświk, Magdalena, Dymerska, Dagmara, Paramasivam, Nagarajan, Schlesner, Matthias, Lubiński, Jan, Hemminki, Kari

Preprints VIEW open_in_new
CollaboratorBMC Plant Biology
2020

Transcriptomic analysis of poco1, a mitochondrial pentatricopeptide repeat protein mutant in Arabidopsis thaliana

Emami, Hossein, Kumar, Abhishek, Kempken, Frank

BMC Plant Biology VIEW open_in_new
CollaboratorIscience
2020

TLR9 polymorphisms might contribute to the ethnicity bias for EBV-infected Nasopharyngeal Carcinoma

Chattopadhyay, Nabanita Roy, Chatterjee, Koustav, Tiwari, Nikhil, Chakrabarti, Sudipta, Sahu, Sushil Kumar, Roy, Sankar Deb, Ghosh, Arijit, Reddy, R Rajendra, Das, Piyanki, Mal, Sudipa

Iscience VIEW open_in_new
Senior AuthorGenomics
2020

Mutational hotspots of HSP47 and its potential role in cancer and bone-disorders

Parveen, Alisha, Kumar, Rajesh, Tandon, Ravi, Khurana, Sukant, Goswami, Chandan, Kumar, Abhishek

Genomics VIEW open_in_new
CollaboratorFront. Bioeng. Biotechnol.
2020

Identification of Familial Hodgkin Lymphoma Predisposing Genes Using Whole Genome Sequencing

Srivastava, Aayushi, Giangiobbe, Sara, Kumar, Abhishek, Dymerska, Dagmara, Behnisch, Wolfgang, Witzens-Harig, Mathias, Lubinski, Jan, Hemminki, Kari, Foersti, Asta, Bandapalli, Obul Reddy

Front. Bioeng. Biotechnol. VIEW open_in_new
CollaboratorInternational Journal of Genomics
2020

From Microbial Genomics to Metagenomics

Kant, Ravi, Kumar, Abhishek, Sironen, Tarja

International Journal of Genomics VIEW open_in_new
CollaboratorMarine Drugs
2020

Characterization of the CAZy Repertoire from the Marine-Derived Fungus Stemphylium lucomagnoense in Relation to Saline Conditions

Ben Ali, Wissal, Navarro, David, Kumar, Abhishek, Drula, Elodie, Turbé-Doan, Annick, Correia, Lydie Oliveira, Baumberger, Stéphanie, Bertrand, Emmanuel, Faulds, Craig B, Henrissat, Bernard

Marine Drugs VIEW open_in_new
First AuthorPreprints
2020

Characterization of Nucleocapsid (N) Protein from Novel Coronavirus SARS-CoV-2

Kumar, Abhishek, Parveen, Alisha, Kumar, Narendra, Bairy, Sneha, Kaushik, Vibha, Chandola, Chetan, Sharma, Jyoti, Sharma, Phulwanti, Agarwal, Akhil, Pandey, Akhilesh

Preprints VIEW open_in_new
CollaboratorbioRxiv
2020

A novel germline mutation in the POT1 gene predisposes to familial non-medullary thyroid cancer

Srivastava, Aayushi, Miao, Beiping, Skopelitou, Diamanto, Kumar, Varun, Kumar, Abhishek, Paramasivam, Nagarajan, Bonora, Elena, Hemminki, Kari, Försti, Asta, Bandapalli, Obul Reddy

CollaboratorCancers
2020

A Germline Mutation in the POT1 Gene Is a Candidate for Familial Non-Medullary Thyroid Cancer

Srivastava, Aayushi, Miao, Beiping, Skopelitou, Diamanto, Kumar, Varun, Kumar, Abhishek, Paramasivam, Nagarajan, Bonora, Elena, Hemminki, Kari, Försti, Asta, Bandapalli, Obul Reddy

CollaboratorBiomolecules
2019

Whole Genome Sequencing of Familial Non-Medullary Thyroid Cancer Identifies Germline Alterations in MAPK/ERK and PI3K/AKT Signaling Pathways

Srivastava, Aayushi, Kumar, Abhishek, Giangiobbe, Sara, Bonora, Elena, Hemminki, Kari, Försti, Asta, Bandapalli, Obul Reddy

Biomolecules VIEW open_in_new
CollaboratorBioscience reports
2019

Transient receptor potential ankyrin1 channel is endogenously expressed in T cells and is involved in immune functions

Sahoo, Subhransu Sekhar, Majhi, Rakesh Kumar, Tiwari, Ankit, Acharya, Tusar, Kumar, P Sanjai, Saha, Somdatta, Kumar, Abhishek, Goswami, Chandan, Chattopadhyay, Subhasis

Bioscience reports VIEW open_in_new
CollaboratorBiochemical and Biophysical Research Communications
2019

TRPA1 is selected as a semi-conserved channel during vertebrate evolution due to its involvement in spermatogenesis

Saha, Somdatta, Sucharita, Samikshya, Majhi, Rakesh Kumar, Tiwari, Ankit, Pradhan, Sunil Kumar, Patra, Bijay Kumar, Dash, Rashmi Ranjan, Nayak, Rabi Narayan, Giri, Sunil C, Routray, Padmanav

Biochemical and Biophysical Research Communications VIEW open_in_new
CollaboratorBiological Research and Reviews
2019

Plant and natural products as modulators of TRP channels

Yadav, Manoj, Saha, Somdutta, Kumar, Abhishek, Gowsami, Chandan

Biological Research and Reviews VIEW open_in_new
Senior AuthorCurrent Genomics
2019

Overview of Genomic Tools for Circular Visualization in the Next generation Genomic Sequencing Era

Parveen, Alisha, Khurana, Sukant, Kumar, Abhishek

Current Genomics VIEW open_in_new
CollaboratorAACR
2019

Identification of familial Hodgkin lymphoma predisposing genes by whole genome sequencing

Giangiobbe, Sara, Srivastava, Aayushi, Kumar, Abhishek, Paramasivam, Nagarajan, Dymerska, Dagmara, Benisch, Wolfgang, Witzens-Harig, Mathias, Schlessner, Mathias, Lubinski, Jan, Hemminki, Kari

CollaboratorCurrent Genomics
2019

Helicobacter pylori Reactivates Human Immunodeficiency Virus-1 in Latently Infected Monocytes with Increased Expression of IL-1β and CXCL8

Natarajan, Vidhya, Moar, Preeti, Kaur, Urvinder S, Venkatesh, Vimala, Kumar, Abhishek, Chaturvedi, Rupesh, Himanshu, D., Tandon, Ravi

Current Genomics VIEW open_in_new
Senior AuthorJournal of Biochemical and Clinical Genetics
2019

Collagen-specific chaperone, heat shock protein 47 kDa (HSP47)-pathway and expression patterns in cancer

Parveen, Alisha, Kumar, Rajesh, Khurana, Sukant, Kumar, Abhishek

Journal of Biochemical and Clinical Genetics VIEW open_in_new
CollaboratorInternational journal of molecular sciences
2019

Characterization and Dye Decolorization Potential of Two Laccases from the Marine-Derived Fungus Pestalotiopsis sp.

Wikee, Saowanee, Hatton, Juliette, Turbé-Doan, Annick, Mathieu, Yann, Daou, Marianne, Lomascolo, Anne, Kumar, Abhishek, Lumyong, Saisamorn, Sciara, Giuliano, Faulds, Craig B

International journal of molecular sciences VIEW open_in_new
Senior AuthorCurrent Genomics
2019

Applications of Machine Learning in miRNA Discovery and Target Prediction

Parveen, Alisha, Mustafa, Syed, Yadav, Pankaj, Kumar, Abhishek

Current Genomics VIEW open_in_new
CollaboratorInternational journal of cancer
2018

Whole genome sequencing reveals DICER1 as a candidate predisposing gene in familial Hodgkin lymphoma

Bandapalli, Obul Reddy, Paramasivam, Nagarajan, Giangiobbe, Sara, Kumar, Abhishek, Benisch, Wolfgang, Engert, Andreas, Witzens‐Harig, Mathias, Schlesner, Mathias, Hemminki, Kari, Försti, Asta

International journal of cancer VIEW open_in_new
Senior AuthorCurrent Science
2018

Spliceosomal proteins encoded by fungal genomes.

Sarde, Sandeep J, Kempken, Frank, Kumar, Abhishek

Current Science VIEW open_in_new
First AuthorBiochemical and biophysical research communications
2018

ShRNA-mediated knock-down of CXCL8 inhibits tumor growth in colorectal liver metastasis

Kumar, Abhishek, Cherukumilli, Madhuri, Mahmoudpour, Seyed Hamidreza, Brand, Karsten, Bandapalli, Obul Reddy

Biochemical and biophysical research communications VIEW open_in_new
Senior AuthorPreprints. org
2018

Overview of Genomic Tools for Circular Visualization in next-Generation Genomic Sequencing Era

Parveen, Alisha, Khurana, Sukank, Kumar, Abhishek

Preprints. org VIEW open_in_new
Senior AuthorPreprints. org
2018

Mutational Hotspots and Protein Interactome Analyses of Collagen-Specific Chaperone—HSP47

Parveen, Alisha, Kumar, Rajesh, Tandon, Ravi, Khurana, Sukant, Goswami, Chandan, Kumar, Abhishek

Preprints. org VIEW open_in_new
CollaboratorPlant molecular biology
2018

Genome-wide identification, classification and expression of lipoxygenase gene family in pepper

Sarde, Sandeep J, Kumar, Abhishek, Remme, Rahima N, Dicke, Marcel

Plant molecular biology VIEW open_in_new
First AuthorScientific reports
2018

Genome Sequencing and analyses of Two Marine Fungi from the North Sea Unraveled a Plethora of Novel Biosynthetic Gene Clusters

Kumar, Abhishek, Sørensen, Jens Laurids, Hansen, Frederik Teilfeldt, Arvas, Mikko, Syed, Muhammad Fahad, Hassan, Lara, Benz, J Philipp, Record, Eric, Henrissat, Bernard, Pöggeler, Stefanie

Scientific reports VIEW open_in_new
First AuthorScientific Reports
2018

Familial Cancer Variant Prioritization Pipeline version 2 (FCVPPv2) applied to a papillary thyroid cancer family

Kumar, Abhishek, Bandapalli, Obul Reddy, Paramasivam, Nagarajan, Giangiobbe, Sara, Diquigiovanni, Chiara, Bonora, Elena, Eils, Roland, Schlesner, Matthias, Hemminki, Kari, Försti, Asta

Scientific Reports VIEW open_in_new
CollaboratorScientific reports
2018

A model species for agricultural pest genomics: the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae)

Schoville, Sean D, Chen, Yolanda H, Andersson, Martin N, Benoit, Joshua B, Bhandari, Anita, Bowsher, Julia H, Brevik, Kristian, Cappelle, Kaat, Chen, Mei-Ju M, Childers, Anna K

Scientific reports VIEW open_in_new
First AuthorProteomics
2018

A Necessary and Timely Upgrade of Python for Bioinformatics, as Second Edition

Kumar, Abhishek

Proteomics VIEW open_in_new
CollaboratorScientific Reports
2017

Preferential selection of Arginine at the lipid-water-interface of TRPV1 during vertebrate evolution correlates with its snorkeling behaviour and cholesterol interaction

Saha, Somdatta, Ghosh, Arijit, Tiwari, Nikhil, Kumar, Ashutosh, Kumar, Abhishek, Goswami, Chandan

Scientific Reports VIEW open_in_new
CollaboratorInt J Genom Data Min2017: JDMG-106. DOI
2017

Genomic Data Mining Unraveled Potential Biocompass in Fruit Flies and Current Status of Magneto genetics

Kumar, A

Int J Genom Data Min2017: JDMG-106. DOI VIEW open_in_new
First AuthorInt J Genom Data Min
2017

Genomic Data Mining Unraveled Potential Biocompass in Fruit Flies Using and Current Status of Magneto genetics

Kumar, Abhishek

Int J Genom Data Min VIEW open_in_new
First AuthorScientific reports
2017

Ancestry & molecular evolutionary analyses of heat shock protein 47 kDa (HSP47/SERPINH1)

Kumar, Abhishek, Bhandari, Anita, Sarde, Sandeep J, Goswami, Chandan

Scientific reports VIEW open_in_new
CollaboratorBioRxiv
2017

A model species for agricultural pest genomics: the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae)

nan

CollaboratorChannels
2016

Why individual thermo sensation and pain perception varies? Clue of disruptive mutations in TRPVs from 2504 human genome data

Ghosh, Arijit, Kaur, Navneet, Kumar, Abhishek, Goswami, Chandan

Channels VIEW open_in_new
CollaboratorHereditary cancer in clinical practice
2016

Pedigree based DNA sequencing pipeline for germline genomes of cancer families

Försti, Asta, Kumar, Abhishek, Paramasivam, Nagarajan, Schlesner, Matthias, Catalano, Calogerina, Dymerska, Dagmara, Lubinski, Jan, Eils, Roland, Hemminki, Kari

Hereditary cancer in clinical practice VIEW open_in_new
CollaboratorThe Marine Microbiome
2016

Marine fungi

Rédou, Vanessa, Vallet, Marine, Meslet-Cladière, Laurence, Kumar, Abhishek, Pang, Ka-Lai, Pouchus, Yves-François, Barbier, Georges, Grovel, Olivier, Bertrand, Samuel, Prado, Soizic

The Marine Microbiome VIEW open_in_new
CollaboratorOncotarget
2016

Germline genetics of cancer of unknown primary (CUP) and its specific subtypes

Hemminki, Kari, Chen, Bowang, Kumar, Abhishek, Melander, Olle, Manjer, Jonas, Hallmans, Göran, Pettersson-Kymmer, Ulrika, Ohlsson, Claes, Folprecht, Gunnar, Löffler, Harald

Oncotarget VIEW open_in_new
CollaboratorGenome announcements
2016

Draft genome sequence of the deep-sea basidiomycetous yeast Cryptococcus sp. strain Mo29 reveals its biotechnological potential

Rédou, Vanessa, Kumar, Abhishek, Hainaut, Matthieu, Henrissat, Bernard, Record, Eric, Barbier, Georges, Burgaud, Gaëtan

Genome announcements VIEW open_in_new
CollaboratorGenome announcements
2016

Draft genome sequence of the deep-sea ascomycetous filamentous fungus Cadophora malorum Mo12 from the Mid-Atlantic Ridge reveals its biotechnological potential

Rédou, Vanessa, Kumar, Abhishek, Hainaut, Matthieu, Henrissat, Bernard, Record, Eric, Barbier, Georges, Burgaud, Gaëtan

Genome announcements VIEW open_in_new
CollaboratorMicrobiology Resource Announcements
2016

Draft Genome Sequence of the Deep-Sea Basidiomycetous Yeast Cryptococcus sp. Strain Mo29 Reveals Its Biotechnological Potential

Vanessa, Rédou, Kumar, Abhishek, Matthieu, Hainaut, Bernard, Henrissat, Record, Eric, Barbier, Georges, Gaëtan, Burgaud

Microbiology Resource Announcements VIEW open_in_new
CollaboratorMicrobiology Resource Announcements
2016

Draft Genome Sequence of the Deep-Sea Ascomycetous Filamentous Fungus Cadophora malorum Mo12 from the Mid-Atlantic Ridge Reveals Its Biotechnological Potential

Vanessa, Rédou, Kumar, Abhishek, Matthieu, Hainaut, Bernard, Henrissat, Record, Eric, Barbier, Georges, Gaëtan, Burgaud

Microbiology Resource Announcements VIEW open_in_new
First AuthorData in brief
2016

Data on the evolutionary history of the V (D) J recombination-activating protein 1–RAG1 coupled with sequence and variant analyses

Kumar, Abhishek, Bhandari, Anita, Sarde, Sandeep J, Muppavarapu, Sekhar, Tandon, Ravi

Data in brief VIEW open_in_new
First AuthorBiochemical and biophysical research communications
2015

Understanding V (D) J recombination initiator RAG1 gene using molecular phylogenetic and genetic variant analyses and upgrading missense and non-coding variants of clinical importance

Kumar, Abhishek, Bhandari, Anita, Sarde, Sandeep J, Muppavarapu, Sekhar, Tandon, Ravi

Biochemical and biophysical research communications VIEW open_in_new
First AuthorProtein and peptide letters
2015

Sequence and structural perspectives of bacterial β-stranded porins

Kumar, Abhishek, Bhandari, Anita, Krishnaswamy, Sankaran

Protein and peptide letters VIEW open_in_new
CollaboratorPloS one
2015

Proteomic analysis of anti-cancerous scopularide production by a marine Microascus brevicaulis strain and its UV mutant

Kramer, Annemarie, Beck, Hans Christian, Kumar, Abhishek, Kristensen, Lars Peter, Imhoff, Johannes F, Labes, Antje

PloS one VIEW open_in_new
CollaboratorBiochemical and biophysical research communications
2015

Influence of membrane cholesterol in the molecular evolution and functional regulation of TRPV4

Kumari, Shikha, Kumar, Ashutosh, Sardar, Puspendu, Yadav, Manoj, Majhi, Rakesh Kumar, Kumar, Abhishek, Goswami, Chandan

Biochemical and biophysical research communications VIEW open_in_new
CollaboratorMarine drugs
2015

Identification of the scopularide biosynthetic gene cluster in Scopulariopsis brevicaulis

Lukassen, Mie Bech, Saei, Wagma, Sondergaard, Teis Esben, Tamminen, Anu, Kumar, Abhishek, Kempken, Frank, Wiebe, Marilyn G, Sørensen, Jens Laurids

Marine drugs VIEW open_in_new
CollaboratorAustin Journal of Genetics and Genomic Research
2015

Gene Duplications and Fates of Genes after Duplication Events

Kumar, A

Austin Journal of Genetics and Genomic Research VIEW open_in_new
Senior AuthorPeerJ
2015

Expression of temperature-sensitive ion channel TRPM8 in sperm cells correlates with vertebrate evolution

Majhi, Rakesh Kumar, Saha, Somdatta, Kumar, Ashutosh, Ghosh, Arijit, Swain, Nirlipta, Goswami, Luna, Mohapatra, Pratyush, Maity, Apratim, Sahoo, Vivek Kumar, Kumar, Abhishek

First AuthorPLoS One
2015

De novo assembly and genome analyses of the marine-derived Scopulariopsis brevicaulis strain LF580 unravels life-style traits and anticancerous scopularide biosynthetic gene cluster

Kumar, Abhishek, Henrissat, Bernard, Arvas, Mikko, Syed, Muhammad Fahad, Thieme, Nils, Benz, J Philipp, Sørensen, Jens Laurids, Record, Eric, Poeggeler, Stefanie, Kempken, Frank

PLoS One VIEW open_in_new
First AuthorPeerJ
2015

Bayesian phylogeny analysis of vertebrate serpins illustrates evolutionary conservation of the intron and indels based six groups classification system from lampreys for ∼500 MY

Kumar, Abhishek

First AuthorBiochemical and biophysical research communications
2014

Surveying genetic variants and molecular phylogeny of cerebral cavernous malformation gene, CCM3/PDCD10

Kumar, Abhishek, Bhandari, Anita, Goswami, Chandan

Biochemical and biophysical research communications VIEW open_in_new
CollaboratorPeerJ PrePrints
2014

Sperm specific expression of temperature-sensitive ion channel TRPM8 correlates with vertebrate evolution

Majhi, Rakesh Kumar, Saha, Somdatta, Kumar, Ashutosh, Swain, Nirlipta, Goswami, Luna, Mohapatra, Pratyush, Maity, Apratim A, Sahoo, Vivek Kumar, Kumar, Abhishek, Goswami, Chandan

PeerJ PrePrints VIEW open_in_new
First AuthorPLoS One
2014

Sequencing, de novo assembly and annotation of the Colorado potato beetle, Leptinotarsa decemlineata, transcriptome

Kumar, Abhishek, Congiu, Leonardo, Lindström, Leena, Piiroinen, Saija, Vidotto, Michele, Grapputo, Alessandro

PLoS One VIEW open_in_new
First AuthorBiochemical and biophysical research communications
2014

Revising angiotensinogen from phylogenetic and genetic variants perspectives

Kumar, Abhishek, Sarde, Sandeep J, Bhandari, Anita

Biochemical and biophysical research communications VIEW open_in_new
First Author
2014

Revising angiotensinogen from phylogenetic and genetic variants

Kumar, Abhishek, Sarde, Sandeep J, Bhandari, Anita

Tribro Research Group VIEW open_in_new
Senior Author
2014

Quantitative proteomics of the regulation patterns in scopularide A and B production by a marine Scopulariopsis brevicaulis strain LF580

Kramer, Annemarie, Beck, Hans Christian, Kumar, Abhishek

Tribro Research Group VIEW open_in_new
Collaborator
2014

Proteomic analysis of Scopulariopsis brevicaulis LF580 and its mutant strain M26 for the production of the cyclodepsipeptides scopularide A and B

Kramer, Annemarie, Beck, HC, Kumar, Abhishek, Labes, Antje, Imhoff, Johannes F

Tribro Research Group VIEW open_in_new
First Author
2014

Next-generation genome and transcriptome based methods for the exploration of secondary metabolites from marine fungi for the treatment of cancer

Kumar, Abhishek, Kempken, Frank

Tribro Research Group VIEW open_in_new
First AuthorBiochemical and biophysical research communications
2014

Molecular phylogeny of C1 inhibitor depicts two immunoglobulin-like domains fusion in fishes and ray-finned fishes specific intron insertion after separation from zebrafish

Kumar, Abhishek, Bhandari, Anita, Sarde, Sandeep J, Goswami, Chandan

Biochemical and biophysical research communications VIEW open_in_new
First AuthorJournal of Genetic Syndromes & Gene Therapy
2014

Genetics: A Computational Approach, 5th Edition by Benjamin A. Pierce

Kumar, Abhishek

Journal of Genetic Syndromes & Gene Therapy VIEW open_in_new
First AuthorImmunobiology
2014

Genetic variants and evolutionary analyses of heparin cofactor II

Kumar, Abhishek, Bhandari, Anita, Sarde, Sandeep J, Goswami, Chandan

Immunobiology VIEW open_in_new
CollaboratorBMC genomics
2013

Transcriptome sequencing and de novo annotation of the critically endangered Adriatic sturgeon

Vidotto, Michele, Grapputo, Alessandro, Boscari, Elisa, Barbisan, Federica, Coppe, Alessandro, Grandi, Gilberto, Kumar, Abhishek, Congiu, Leonardo

BMC genomics VIEW open_in_new
CollaboratorChannels
2013

Thermosensitive ion channel TRPV1 is endogenously expressed in the sperm of a fresh water teleost fish (Labeo rohita) and regulates sperm motility

Majhi, Rakesh Kumar, Kumar, Ashutosh, Yadav, Manoj, Swain, Nirlipta, Kumari, Shikha, Saha, Ashish, Pradhan, Avinash, Goswami, Luna, Saha, Somdatta, Samanta, Luna

Channels VIEW open_in_new
CollaboratorPLoS genetics
2013

The genome and development-dependent transcriptomes of Pyronema confluens: a window into fungal evolution

Traeger, Stefanie, Altegoer, Florian, Freitag, Michael, Gabaldon, Toni, Kempken, Frank, Kumar, Abhishek, Marcet-Houben, Marina, Pöggeler, Stefanie, Stajich, Jason E, Nowrousian, Minou

PLoS genetics VIEW open_in_new
First AuthorBiochemical and biophysical research communications
2013

Sequence, phylogenetic and variant analyses of antithrombin III

Kumar, Abhishek, Bhandari, Anita, Sarde, Sandeep J, Goswami, Chandan

Biochemical and biophysical research communications VIEW open_in_new
First Author
2013

Genome sequencing, assembly and annotation of three marine fungal isolates using different next generation DNA sequencing methods for pharmaceutically important secondary metabolites

Kumar, Abhishek, Kempken, Frank

Tribro Research Group VIEW open_in_new
First Author
2013

Genome sequencing, assembly and annotation of a marine fungal isolate of Scopulariopsis brevicaulis using three different next generation sequencing technologies

Kumar, Abhishek, Kempken, Frank

Tribro Research Group VIEW open_in_new
First Author
2013

Genome sequencing, assembly and annotation of a marine fungal isolate of Pestalotiopsis using next generation sequencing technologies

Kumar, Abhishek, Kempken, Frank

Tribro Research Group VIEW open_in_new
First Author
2013

Genome sequencing, assembly and annotation of a marine fungal isolate of Calcarisporium using different next generation sequencing technologies

Kumar, Abhishek, Kempken, Frank

Tribro Research Group VIEW open_in_new
CollaboratorPloS one
2013

Deletions in cox2 mRNA Result in Loss of Splicing and RNA Editing and Gain of Novel RNA Editing Sites

Grüttner, Stefanie, Hopf, Christina, Kumar, Abhishek, Kempken, Frank

PloS one VIEW open_in_new
First AuthorBiochemical and biophysical research communications
2013

Characterization of bud emergence 46 (BEM46) protein: sequence, structural, phylogenetic and subcellular localization analyses

Kumar, Abhishek, Kollath-Leiß, Krisztina, Kempken, Frank

Biochemical and biophysical research communications VIEW open_in_new
First Author
2012

The draft genome of marine isolate of Scopulariopsis brevicaulis using three different next generation sequencing methods

Kumar, Abhishek

Tribro Research Group VIEW open_in_new
First AuthorNature Publishing Group
2012

Structural Analysis of Outer Membrane Beta-stranded Porins using Temperature Factor

Kumar, Abhishek, Krishnaswamy, Sankaran

Nature Publishing Group VIEW open_in_new
First Author
2012

Next-generation genome sequencing, assembly, annotation and analysis of a marine isolate of Scopulariopsis brevicaulis

Kumar, Abhishek

Tribro Research Group VIEW open_in_new
First AuthorPLoS One
2012

Molecular phylogeny of OVOL genes illustrates a conserved C2H2 zinc finger domain coupled by hypervariable unstructured regions

Kumar, Abhishek, Bhandari, Anita, Sinha, Rahul, Sardar, Puspendu, Sushma, Miss, Goyal, Pankaj, Goswami, Chandan, Grapputo, Alessandro

PLoS One VIEW open_in_new
First Author
2012

Marine fungal isolates: genome sequence analysis using different next generation DNA sequencing methods to find potential cancer drugs

Kumar, Abhishek

Tribro Research Group VIEW open_in_new
First AuthorA. Kumar Biobased-world Achema Conference, Frankfurt, Germany (Vortrag)
2012

Genome sequencing, assembly and annotation of a marine fungal isolate of biotechnological interest (Scopulariopsis brevicaulis) using three different next generation sequencing technologies

Kumar, Abhishek, Kempken, Frank

A. Kumar Biobased-world Achema Conference, Frankfurt, Germany (Vortrag) VIEW open_in_new
First AuthorGZMB-Kolloquium Mikrobiologie, Göttingen, Germany (Vortrag)
2012

Genome sequencing of three marine fungi: genome characterisation for secondary metabolite catalogues, kinomes and transposons using next-generation genome sequencing

Kumar, Abhishek, Kempken, Frank

GZMB-Kolloquium Mikrobiologie, Göttingen, Germany (Vortrag) VIEW open_in_new
First Author
2012

Genome sequence analysis of three marine fungal isolates using different next generation DNA sequencing methods

Kumar, Abhishek, Kempken, Frank

Tribro Research Group VIEW open_in_new
First Author
2012

Genome and RNA sequencing, assembly and annotation of three marine fungal isolates using different next generation DNA sequencing methods for pharmaceutically important secondary metabolites

Kumar, Abhishek

Tribro Research Group VIEW open_in_new
CollaboratorPLoS One
2012

Conservation of tubulin-binding sequences in TRPV1 throughout evolution

Sardar, Puspendu, Kumar, Abhishek, Bhandari, Anita, Goswami, Chandan

PLoS One VIEW open_in_new
First AuthorPloS one
2011

Spliceosomal intron insertions in genome compacted ray-finned fishes as evident from phylogeny of MC receptors, also supported by a few other GPCRs

Kumar, Abhishek, Bhandari, Anita, Sinha, Rahul, Goyal, Pankaj, Grapputo, Alessandro

PloS one VIEW open_in_new
CollaboratorPloS one
2011

STK35L1 associates with nuclear actin and regulates cell cycle and migration of endothelial cells

Goyal, Pankaj, Behring, Antje, Kumar, Abhishek, Siess, Wolfgang

PloS one VIEW open_in_new
First Author
2010

Phylogenomics of vertebrate serpins

Kumar, Abhishek

Tribro Research Group VIEW open_in_new
CollaboratorNature Publishing Group
2009

Water soluble carbon nanotubes affect growth of the common gram (Cicer arietinum)

Tripathi, Shweta, Sonkar, Sumit Kumar, Kumar, Abhishek, Khan, MY, Sarkar, Sabyasachi

Nature Publishing Group VIEW open_in_new
CollaboratorNature Publishing Group
2009

Water soluble carbon nanotubes affect growth of the common gram (Cicer arietinum)

Tripathi, Shweta, Sonkar, Sumit Kumar, Kumar, Abhishek, Khan, MY, Sarkar, Sabyasachi

Nature Publishing Group VIEW open_in_new
First AuthorNature Publishing Group
2009

Structural analysis of outer membrane beta-stranded porins using B-factor

Kumar, Abhishek, Krishnaswamy, S

Nature Publishing Group VIEW open_in_new
CollaboratorBMC Evolutionary Biology
2009

Multiple gains of spliceosomal introns in a superfamily of vertebrate protease inhibitor genes

Ragg, Hermann, Kumar, Abhishek, Köster, Katharina, Bentele, Caterina, Wang, Yunjie, Frese, Marc-André, Prib, Natalie, Krüger, Olaf

BMC Evolutionary Biology VIEW open_in_new
CollaboratorPloS one
2009

Identifying and characterizing a novel protein kinase STK35L1 and deciphering its orthologs and close-homologs in vertebrates

Goyal, Pankaj, Behring, Antje, Kumar, Abhishek, Siess, Wolfgang

PloS one VIEW open_in_new
First AuthorNature Publishing Group
2009

Delving into vertebrate serpins for understanding their evolution

Kumar, Abhishek

Nature Publishing Group VIEW open_in_new
Senior AuthorNature Publishing Group
2008

Temperature factor analysis of outer membrane β-stranded porin crystal structures suggests the pore is not uniformly rigid

Krishnaswamy, S, Kumar, Abhishek

Nature Publishing Group VIEW open_in_new
First AuthorBMC evolutionary biology
2008

Ancestry and evolution of a secretory pathway serpin

Kumar, Abhishek, Ragg, Hermann

BMC evolutionary biology VIEW open_in_new
First AuthorJournal of Genomics

Urochordate serpins are Classified into Six Groups Encoded by Exon-Intron Structures, Microsynteny and Bayesian Phylogenetic Analyses

Kumar, Abhishek, Bhandari, Anita

Journal of Genomics VIEW open_in_new
Collaboratorhttps://www.medrxiv.org/content/10.1101/2019.12.12.19014324v1?fbclid …

Identification of Familial Hodgkin Lymphoma Predisposing Genes Using Whole Genome Sequencing

Aayushi Srivastava, Sara Giangiobbe, Abhishek Kumar, Dagmara Dymerska, Wolfgang Behnisch, Mathias Witzens-Harig, Jan Lubinski, Kari Hemminki, Asta Foersti, Obul Reddy Bandapalli

https://www.medrxiv.org/content/10.1101/2019.12.12.19014324v1?fbclid … VIEW open_in_new
First Author

A Germline Mutation in the POT1 Gene Is a Candidate for Familial Non-Medullary Thyroid Cancer

Kumar, Abhishek, Paramasivam, Nagarajan, Bonora, Elena, Hemminki, Kari

Tribro Research Group VIEW open_in_new
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